The detailed information of tRNA gene sequence


Sequence ID>WENV180096623
Genome IDMTBK01139006
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1104
End posion on genome 1016
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatatcttaa
tRNA gene sequence 
GGAGGGTTGGCTGAGCGGTCCAAAGCAGCGGTTTGCTAAACCGTGGTCGTCTAAAAGCGA
CCCGTGGGTTCGAATCCCACACCCTCCGCat
Downstream region at tRNA end position 
ttcattaatc
Secondary structure (Cloverleaf model)
>WENV180096623	Ser	GCT
                   a      GCat ttcattaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C C A        A     GGTCGTCTAAAAGCGACCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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