The detailed information of tRNA gene sequence


Sequence ID>WENV180096625
Genome IDMTBK01139475
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 106
End posion on genome 33
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gggcagacac
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGAGCCCAtcg
Downstream region at tRNA end position 
ttgtttttga
Secondary structure (Cloverleaf model)
>WENV180096625	Val	GAC
                   c      Atcg ttgtttttga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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