The detailed information of tRNA gene sequence


Sequence ID>WENV180096628
Genome IDMTBK01139836
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 567
End posion on genome 641
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttccccaccg
tRNA gene sequence 
AGGGCAGTAGCTCAGCTGGTAGAGCATCGGTCTCCAAAACCGACGGTCGGGGGTTCGAAT
CCCTCCTGCCCTGCCc
Downstream region at tRNA end position 
aacgcaccaa
Secondary structure (Cloverleaf model)
>WENV180096628	Trp	CCA
                   g      GCCc aacgcaccaa
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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