The detailed information of tRNA gene sequence


Sequence ID>WENV180096638
Genome IDMTBK01140499
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 8121
End posion on genome 8194
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tgttgtaacc
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTAGAGCGTCTGAATGGCATTCAGAAGGTCAGGGGTTCGATT
CCCCTTACCTCCACac
Downstream region at tRNA end position 
agaagtcctt
Secondary structure (Cloverleaf model)
>WENV180096638	Ala	GGC
                   c      ACac agaagtcctt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G + T          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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