The detailed information of tRNA gene sequence


Sequence ID>WENV180096649
Genome IDMTBK01140907
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 158
End posion on genome 235
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaagtttggc
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGCTAGCGCGCCTGAATGGGGTTCAGGAGGTCGCGAGTTCAA
GTCTCGCCGCTCCGACCA
Downstream region at tRNA end position 
tttttttgtc
Secondary structure (Cloverleaf model)
>WENV180096649	Pro	GGG
                   c      ACCA tttttttgtc
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     C G C T C     A
    T T G A        A      | | | | |     A
  T         C G C G       G C G A G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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