The detailed information of tRNA gene sequence


Sequence ID>WENV180096653
Genome IDMTBK01141052
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 235
End posion on genome 307
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tagaggcaca
tRNA gene sequence 
GCTGATATAGTGTAGGGGACAATCATGCAGGACTCTCACTCCTGCGACTGGGGTTCAAAT
CCCCATATCAGCAttc
Downstream region at tRNA end position 
tgacttgtag
Secondary structure (Cloverleaf model)
>WENV180096653	Glu	CTC
                   a      Attc tgacttgtag
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     A C C C C     A
      G G A        A      | | | | |     A
    G       T G T G       T G G G G     C
    G         | | +                 T T
    A       T C A T
      C A A        G     CGAC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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