The detailed information of tRNA gene sequence


Sequence ID>WENV180096654
Genome IDMTBK01141101
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 549
End posion on genome 622
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctttttttc
tRNA gene sequence 
GGCGGTGTAGCTCAGTGGTAAGAGCAGCGGCTTCATAAGCCGTGTGTCGTAGGTTCAAAT
CCCACCACCGCTACaa
Downstream region at tRNA end position 
aggaagcagt
Secondary structure (Cloverleaf model)
>WENV180096654	Met	CAT
                   c      ACaa aggaagcagt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | |   | |     A
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      A A          A     GTGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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