The detailed information of tRNA gene sequence


Sequence ID>WENV180096665
Genome IDMTBK01142030
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1835
End posion on genome 1762
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtgcagtcca
tRNA gene sequence 
AGGGCAATAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGT
CCCTCTTGCCCTGCga
Downstream region at tRNA end position 
atcgggcgtg
Secondary structure (Cloverleaf model)
>WENV180096665	Trp	CCA
                   a      GCga atcgggcgtg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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