The detailed information of tRNA gene sequence


Sequence ID>WENV180096668
Genome IDMTBK01142171
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 963
End posion on genome 877
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttctacattT
tRNA gene sequence 
GGAGCGGTGTCCGAGCGGTTGAAGGAGGCGGTCTTGAAAACCGTTGTGCCGAGAGGCACC
GGGGGTTCGAATCCCCCCTGCTCCGTag
Downstream region at tRNA end position 
ggggattcga
Secondary structure (Cloverleaf model)
>WENV180096668	Ser	TGA
                   T      GTag ggggattcga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGTGCCGAGAGGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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