The detailed information of tRNA gene sequence


Sequence ID>WENV180096669
Genome IDMTBK01142171
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 549
End posion on genome 460
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atacattttT
tRNA gene sequence 
GGAGCGGTGCGAGAGCGGTTGAATCGGGCTCCCTGCTAAGGAGTTGTACCCCGAAAGGGT
ACCGGGGGTTCGAATCCCCCCTGCTCCGTag
Downstream region at tRNA end position 
aaaaatttga
Secondary structure (Cloverleaf model)
>WENV180096669	Ser	GCT
                   T      GTag aaaaatttga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGTACCCCGAAAGGGTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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