The detailed information of tRNA gene sequence


Sequence ID>WENV180096671
Genome IDMTBK01142171
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 364
End posion on genome 276
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtttttttT
tRNA gene sequence 
GGAGAGATGCGAGAGCGGTTGAATCGGGCGGTCTCGAAAACCGTTGATCTCAAACGAGGT
CCGAGGGTTCGAATCCCTCTCTCTCCGAag
Downstream region at tRNA end position 
gagagagagg
Secondary structure (Cloverleaf model)
>WENV180096671	Ser	CGA
                   T      GAag gagagagagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G A G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGATCTCAAACGAGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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