The detailed information of tRNA gene sequence


Sequence ID>WENV180096678
Genome IDMTBK01142487
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 407797
End posion on genome 407725
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccagacaacc
tRNA gene sequence 
GGGGATGTAGCTTAGTCGGGAGAGCGCCTCCTTTGCAAGGAGGAGGTCAGGGGTTCGAGT
CCCCTCATCTCCAtaa
Downstream region at tRNA end position 
tagaggagac
Secondary structure (Cloverleaf model)
>WENV180096678	Ala	TGC
                   c      Ataa tagaggagac
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    C       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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