The detailed information of tRNA gene sequence


Sequence ID>WENV180096682
Genome IDMTBK01142487
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 391494
End posion on genome 391420
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaaagtaccT
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCACCGCTCTCCAAAAGCGGGGGCTGAGGGTTCGAGT
CCTTCCTGACCTGTtg
Downstream region at tRNA end position 
atgttgattt
Secondary structure (Cloverleaf model)
>WENV180096682	Trp	CCA
                   T      GTtg atgttgattt
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGCT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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