The detailed information of tRNA gene sequence


Sequence ID>WENV180096685
Genome IDMTBK01142487
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 256200
End posion on genome 256125
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gctacacttT
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCACTGGTTCGAG
TCCAGTAGTGCCCATtt
Downstream region at tRNA end position 
ttaccactct
Secondary structure (Cloverleaf model)
>WENV180096685	Val	CAC
                   T      ATtt ttaccactct
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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