The detailed information of tRNA gene sequence


Sequence ID>WENV180096700
Genome IDMTBK01143457
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 810
End posion on genome 732
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tccgtttctt
tRNA gene sequence 
CGGAGCGTGGCGCAGCCTGGCTTAGCGCGCTTGCCTTGGGAGCAAGAGGTCGCCGGTTCG
AATCCGGCCGCTCCGACCA
Downstream region at tRNA end position 
gaccggtcaa
Secondary structure (Cloverleaf model)
>WENV180096700	Pro	TGG
                   t      ACCA gaccggtcaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G G C C     A
    C C G A        G      | | | | |     G
  T         C G C G       G C C G G     C
  G         | | | |                 T T
  G         G C G C
    C T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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