The detailed information of tRNA gene sequence


Sequence ID>WENV180096707
Genome IDMTBK01143758
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1087
End posion on genome 1162
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
ttgctttgat
tRNA gene sequence
ACGCCTGTAGCTCAACTGGCAGAGCGGCGGTCTCCAAAACCGCAGGCTGGGGGTTCGATT
CCCTCCGGGCGTGCCA
Downstream region at tRNA end position
attttgtata
Secondary structure (Cloverleaf model)
>WENV180096707	Trp	CCA
                   t      GCCA attttgtata
                     A - T
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGCT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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