The detailed information of tRNA gene sequence


Sequence ID>WENV180096709
Genome IDMTBK01143850
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 18
End posion on genome 93
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aagggtagat
tRNA gene sequence 
GGGGCTGTAGCTCAGACGGGAGAGTGCCTCCTTGGCGTGGAGGAAGTCGCGGGTTCGATT
CCCGCCAGCTCCACCA
Downstream region at tRNA end position 
tttttcctac
Secondary structure (Cloverleaf model)
>WENV180096709	Ala	GGC
                   t      ACCA tttttcctac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     C G C C C     A
      A G A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      G A          G     AAGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       G
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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