The detailed information of tRNA gene sequence


Sequence ID>WENV180096710
Genome IDMTBK01143913
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 450
End posion on genome 379
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aataattttt
tRNA gene sequence 
GGCGCCGTACCCAAGCGGTAAGGGAGAGGTCTGCAAAACCTTTATGCAACGGTTCGAATC
CGTTCGGCGCCTttt
Downstream region at tRNA end position 
tatcaatttt
Secondary structure (Cloverleaf model)
>WENV180096710	Cys	GCA
                   t      Tttt tatcaatttt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T T G C C     A
        G A        A      | | | | |     G
      C     A C C C       A A C G G     C
      G       | | |                 T T
      G     A G G G
        T A        A     TATGC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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