The detailed information of tRNA gene sequence


Sequence ID>WENV180096712
Genome IDMTBK01143935
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 679
End posion on genome 594
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aaagagaaat
tRNA gene sequence 
GCCGGTGTGATGGAATGGCAGACGTGTCGCACTCAAAATGCGATGGGGACATCCCCGTGC
CGGTTCGAGTCCGGCCACCGGCACCA
Downstream region at tRNA end position 
gaaaaaggat
Secondary structure (Cloverleaf model)
>WENV180096712	Leu	CAA
                   t      ACCA gaaaaaggat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    G       G G T A       G C C G G     C
    G         | + |                 T T
    C       A C G T
      A G          G     TGGGGACATCCCCGT
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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