The detailed information of tRNA gene sequence


Sequence ID>WENV180096721
Genome IDMTBK01144132
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 408
End posion on genome 319
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaattttac
tRNA gene sequence 
GGAGAGATGGGTGAGCGGCTGAAACCAGCAGTTTGCTAAACTGCGATACTCGTCAAAGGG
TATCGGGGGTTCGAATCCCCCTCTCTCCGCtt
Downstream region at tRNA end position 
tttttatcaa
Secondary structure (Cloverleaf model)
>WENV180096721	Ser	GCT
                   c      GCtt tttttatcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     GATACTCGTCAAAGGGTATC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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