The detailed information of tRNA gene sequence


Sequence ID>WENV180096722
Genome IDMTBK01144464
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2790
End posion on genome 2865
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ccgcgcgctg
tRNA gene sequence 
GGGCCCTTAGCTCAGGTGGTAGAGCTGCTGGCTTTTAACCAGTAGGTCGGGGGTTCGAAT
CCCTCAGGGCCCACCA
Downstream region at tRNA end position 
gcacggagtt
Secondary structure (Cloverleaf model)
>WENV180096722	Lys	TTT
                   g      ACCA gcacggagtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C T C C C     A
      G G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     AGGTC
                    G + T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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