The detailed information of tRNA gene sequence


Sequence ID>WENV180096730
Genome IDMTBK01144739
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 387
End posion on genome 295
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctctttcaag
tRNA gene sequence 
GGAGAGATGGCCGAGTGGACGAAGGCGTTCGCCTGCTAAGCGAATGTAGGGCCAAAAGCT
CTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cattcctcat
Secondary structure (Cloverleaf model)
>WENV180096730	Ser	GCT
                   g      GCCA cattcctcat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     TGTAGGGCCAAAAGCTCTACC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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