The detailed information of tRNA gene sequence


Sequence ID>WENV180096733
Genome IDMTBK01144849
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 44997
End posion on genome 45094
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcagtatgca
tRNA gene sequence 
GGAGGCGAATGCGTCCCGGTGGGCGCCCTGGACTTCAAATCCAGTGGGAGGCGGTGATGG
CCGTCTTCGGTGGGTTCGACCCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
tattctgccg
Secondary structure (Cloverleaf model)
>WENV180096733	SeC	TCA
                   a      GCCA tattctgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   A          C C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       T G C G       G T G G G     C
    G       + | | |                 T T
    T       G C G C
      G G          C     TGGGAGGCGGTGATGGCCGTCTTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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