The detailed information of tRNA gene sequence


Sequence ID>WENV180096738
Genome IDMTBK01144849
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 75983
End posion on genome 76059
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
catttatcag
tRNA gene sequence 
GCGCCTGTAGCTCAGCCGGACAGAGCAACGGCCTTCTAAGCCGTGGGTCGCGGGTTCGAA
TCCTGCCGGGCGCGCCA
Downstream region at tRNA end position 
gtagacagag
Secondary structure (Cloverleaf model)
>WENV180096738	Arg	TCT
                   g      GCCA gtagacagag
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | + | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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