The detailed information of tRNA gene sequence


Sequence ID>WENV180096750
Genome IDMTBK01144980
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 329
End posion on genome 244
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagggtcaga
tRNA gene sequence 
GTCGAGGTCGCCTAGCTTGGTATGGCGCAGGTTTGCTAAACCTGTTCCGCTCCGCGGATC
GTGGGTTCGAATCCCACCCTCGGCGCta
Downstream region at tRNA end position 
ttttaccagt
Secondary structure (Cloverleaf model)
>WENV180096750	Ser	GCT
                   a      GCta ttttaccagt
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    T       T C C G       G T G G G     C
    T         | | |                 T T
    G       T G G C
      G T A        G     TTCCGCTCCGCGGATC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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