The detailed information of tRNA gene sequence


Sequence ID>WENV180096756
Genome IDMTBK01145898
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 350
End posion on genome 425
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgatcaagat
tRNA gene sequence 
GGGTGCTTAGCTCAGCCGGGAGAGCACATGCTTCACACGCATGGGGTCGCTGGTTCAAGT
CCAGTAGTACCCACCA
Downstream region at tRNA end position 
gtgaaagccc
Secondary structure (Cloverleaf model)
>WENV180096756	Val	CAC
                   t      ACCA gtgaaagccc
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T
                     C - G
                     T - A          T G
                    T     T G A C C     A
      C G A        A      + | | | |     A
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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