The detailed information of tRNA gene sequence


Sequence ID>WENV180096762
Genome IDMTBK01146503
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1918
End posion on genome 2007
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaatcatat
tRNA gene sequence 
GGAAGGGTGCTTGAGTGGCCGAAAAGAGCCGCCTGCTAAGCGGTTGAGGGTTTACGCCCT
CCGAGGGTTCAAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
ttatatgcgc
Secondary structure (Cloverleaf model)
>WENV180096762	Ser	GCT
                   t      GCCA ttatatgcgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T T C       G A G G G     C
    G         | | |                 T T
    C       A A A G
      C G A        A     TGAGGGTTTACGCCCTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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