The detailed information of tRNA gene sequence


Sequence ID>WENV180096767
Genome IDMTBK01146823
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 598
End posion on genome 522
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtcaaaacag
tRNA gene sequence 
GGGTTGTTAGCTCAGTCGGTTCAGAGCGCATGCTTCACACGCATGAGGTCACTGGTTCGA
ATCCAGTACAGCCCACCt
Downstream region at tRNA end position 
gcaaatgaga
Secondary structure (Cloverleaf model)
>WENV180096767	Val	CAC
                   g      ACCt gcaaatgaga
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C
                     T - A          T A
                    T     T G A C C     A
    C T G A        A      | | | | |     G
  G         C T C G       A C T G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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