The detailed information of tRNA gene sequence


Sequence ID>WENV180096782
Genome IDMTBK01147545
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 559
End posion on genome 473
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcttaaaaa
tRNA gene sequence 
GGAGAGATGCCTGAGCGGTCGAAAGGACACGCTTGGAGAGCGTGCATATGAGCAATCATA
TCGTGGGTTCGAATCCCACTCTCTCCGtcc
Downstream region at tRNA end position 
cgctaaccta
Secondary structure (Cloverleaf model)
>WENV180096782	Ser	GGA
                   a      Gtcc cgctaaccta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CATATGAGCAATCATATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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