The detailed information of tRNA gene sequence


Sequence ID>WENV180096793
Genome IDMTBK01148145
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2243
End posion on genome 2159
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttctacatcT
tRNA gene sequence 
GCCGGCATGGTGAAATGGCATACACGGTAGACTCAAAATCTGCTGCTTGCAAGAGCGTGT
GGGTTCAAGTCCCACTGCCGGCATta
Downstream region at tRNA end position 
aaagcgcttt
Secondary structure (Cloverleaf model)
>WENV180096793	Leu	CAA
                   T      ATta aaagcgcttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     C A C C C     A
      T A A        G      | | | | |     A
    G       A G T G       G T G G G     C
    G         | | |                 T T
    C       A C A C
      A T          G     TGCTTGCAAGAGCGT
                    G - C
                    T + G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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