The detailed information of tRNA gene sequence


Sequence ID>WENV180096794
Genome IDMTBK01148212
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2095
End posion on genome 2000
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tttgaggcat
tRNA gene sequence 
GGGGGTAGCTGGCGGCCTGGTGGCGCTCCTGGACTTCAAATCCAGTGGTGGGCCTGAAAA
GTCCACGGTGGGTTCGATTCCCATCTACTCCCGCCA
Downstream region at tRNA end position 
ttttgagggt
Secondary structure (Cloverleaf model)
>WENV180096794	SeC	TCA
                   t      GCCA ttttgagggt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    C     T A C C C     A
      C C G        T      + | | | |     G
    T       G C G G       G T G G G     C
    G       | | | +                 T T
    G       C G C T
      T G G        C     TGGTGGGCCTGAAAAGTCCACG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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