The detailed information of tRNA gene sequence


Sequence ID>WENV180096795
Genome IDMTBK01148320
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1141
End posion on genome 1218
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gagatgtcgt
tRNA gene sequence 
CGGGGCGTAGCGTAGCCTGGCTAGCGCGCTTGTTTCGGGTACAAGAGGTCGAGAGTTCAA
ATCTCTCCGCCCCGACCA
Downstream region at tRNA end position 
tttcaaagag
Secondary structure (Cloverleaf model)
>WENV180096795	Pro	CGG
                   t      ACCA tttcaaagag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
    C C G A        A      | | | | |     A
  T         T G C G       G A G A G     C
  G         + | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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