The detailed information of tRNA gene sequence


Sequence ID>WENV180096803
Genome IDMTBK01148827
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 732
End posion on genome 658
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gagcaatcga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCAAA
TCCTGTCCCCGCTACgt
Downstream region at tRNA end position 
gtgatgtcgc
Secondary structure (Cloverleaf model)
>WENV180096803	fMet	CAT
                   a      ACgt gtgatgtcgc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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