The detailed information of tRNA gene sequence


Sequence ID>WENV180096805
Genome IDMTBK01149707
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1901
End posion on genome 1825
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caagcaaaac
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGTCGACGGTTCGAG
CCCGTTCCGGGTCGCCA
Downstream region at tRNA end position 
ttttaaattt
Secondary structure (Cloverleaf model)
>WENV180096805	Asp	GTC
                   c      GCCA ttttaaattt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C G
                    T     T T G C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A C G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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