The detailed information of tRNA gene sequence


Sequence ID>WENV180096810
Genome IDMTBK01149877
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 664
End posion on genome 753
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatggattac
tRNA gene sequence 
GGAAGGGTGCCGGAGTGGTTTAACGGAACGATCTGGAAAGTCGTGTCCTTTTAATAGGAC
TCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
gtttacggat
Secondary structure (Cloverleaf model)
>WENV180096810	Ser	GGA
                   c      GCCA gtttacggat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T T A        A     GTCCTTTTAATAGGACTC
                    A - T
                    C - G
                    G - C
                    A - T
                    T + G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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