The detailed information of tRNA gene sequence


Sequence ID>WENV180096819
Genome IDMTBK01150461
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1643
End posion on genome 1716
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tagcgaccaa
tRNA gene sequence 
GGGGCTATAGCGCAGTTGGTAGCGCGTCTCGTTCGCATCGAGAAGGTCAGGGGTTCGATT
CCCCTTAGCTCCACtc
Downstream region at tRNA end position 
ccaaaaatgc
Secondary structure (Cloverleaf model)
>WENV180096819	Ala	CGC
                   a      ACtc ccaaaaatgc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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