The detailed information of tRNA gene sequence


Sequence ID>WENV180096820
Genome IDMTBK01150787
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 17212
End posion on genome 17137
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ctcccgccgt
tRNA gene sequence 
GGGGCAGTAGCTCAGCTGGGAGAGCACCACGTTCGCAACGTGGGGGTCGAGGGTTCGAAT
CCCTTCTGCTCCACCA
Downstream region at tRNA end position 
ttttttctcg
Secondary structure (Cloverleaf model)
>WENV180096820	Ala	CGC
                   t      ACCA ttttttctcg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     T T C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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