The detailed information of tRNA gene sequence


Sequence ID>WENV180096826
Genome IDMTBK01150966
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 406
End posion on genome 483
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtttgatatt
tRNA gene sequence 
CGGGGCGTAGCGTAGTTTGGCTAGCGCGCCTGCTTTGGGAGCAGGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttgtccacc
Secondary structure (Cloverleaf model)
>WENV180096826	Pro	TGG
                   t      ACCA tttgtccacc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T T G A        A      + | | | |     A
  T         T G C G       G G A G G     C
  G         + | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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