The detailed information of tRNA gene sequence


Sequence ID>WENV180096828
Genome IDMTBK01151078
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 558
End posion on genome 635
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gattaaagat
tRNA gene sequence 
CGGGATGTAGCGCAGACCGGTTAGCGCGCTCGGTTCGGGACCGAGAAGTCGGAGGTTCAA
ATCCTCTCATCCCGACCA
Downstream region at tRNA end position 
ttttttgtat
Secondary structure (Cloverleaf model)
>WENV180096828	Pro	CGG
                   t      ACCA ttttttgtat
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C A G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AAGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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