The detailed information of tRNA gene sequence


Sequence ID>WENV180096840
Genome IDMTBK01151125
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 15175
End posion on genome 15099
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gatattgcgg
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCACCTGGTTCGGGACCAGGGAGTCGGCGGTTCGAA
TCCGCCCGCCCCGACCA
Downstream region at tRNA end position 
ttaaagggag
Secondary structure (Cloverleaf model)
>WENV180096840	Pro	CGG
                   g      ACCA ttaaagggag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C G C C     A
      C G A        A      | | | | |     G
    T       C G C G       G G C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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