The detailed information of tRNA gene sequence


Sequence ID>WENV180096842
Genome IDMTBK01151332
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 997
End posion on genome 1072
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attaaaatac
tRNA gene sequence 
TGCGGCGTGGAGTAAAGGTAACTCAACAGTCTCATAAGCTGTTTTCGTGAGGGTTCGAGT
CCCTCCGCCGCTACCA
Downstream region at tRNA end position 
tagagatcga
Secondary structure (Cloverleaf model)
>WENV180096842	Met	CAT
                   c      ACCA tagagatcga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
        A A        G      | | | | |     G
      A     T G A G       G A G G G     C
      G     | | | |                 T T
      G     A C T C
        T A        A     TTTCGT
                    A - T
                    C - G
                    A - T
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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