The detailed information of tRNA gene sequence


Sequence ID>WENV180096845
Genome IDMTBK01151516
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3020
End posion on genome 2945
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cccaaattgt
tRNA gene sequence 
GGGGGTGTAGCGCAGCTGGGAGCGCACCTGCTTTGCAAGCAGGGGGTCAGGAGTTCGATC
CTCCTCATCTCCACCA
Downstream region at tRNA end position 
acatgggctc
Secondary structure (Cloverleaf model)
>WENV180096845	Ala	TGC
                   t      ACCA acatgggctc
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          C T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C G C G       A G G A G     C
    G       | | | |                 T T
    G       G C G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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