The detailed information of tRNA gene sequence


Sequence ID>WENV180096847
Genome IDMTBK01151538
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 237
End posion on genome 148
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagataatcc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGAATGGAACAGTCTTGAAAACTGTCATCCGTGCAAGCGGA
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ggacaattta
Secondary structure (Cloverleaf model)
>WENV180096847	Ser	TGA
                   c      GCCA ggacaattta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G C G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        A     CATCCGTGCAAGCGGATC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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