The detailed information of tRNA gene sequence


Sequence ID>WENV180096852
Genome IDMTBK01151964
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3038
End posion on genome 3112
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttgaccttt
tRNA gene sequence 
GGTGGCATAGCTCAGTCGGTAGAGCAAGCGGCTCATATCCGCTCGGTCAGGGGTTCAAGT
CCCTTTGCCACTACCt
Downstream region at tRNA end position 
acaaagacct
Secondary structure (Cloverleaf model)
>WENV180096852	Met	CAT
                   t      ACCt acaaagacct
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     T T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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