The detailed information of tRNA gene sequence


Sequence ID>WENV180096854
Genome IDMTBK01152113
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 312
End posion on genome 396
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acgtcataaa
tRNA gene sequence 
CGGAGTAGTGGCGGGTCTGGTTTCGCTTCCAGTTTTGGGAACTGGCGCCGTAAGGCATCG
AAGGTTCGAATCCTTCTACTCCGACta
Downstream region at tRNA end position 
cttgttgttg
Secondary structure (Cloverleaf model)
>WENV180096854	Pro	TGG
                   a      ACta cttgttgttg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    G     C T T C C     A
    C T G G        T      | | | | |     G
  T         G C G G       G A A G G     C
  G         | | | +                 T T
  G         C G C T
    T T T          T     CGCCGTAAGGCATC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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