The detailed information of tRNA gene sequence


Sequence ID>WENV180096858
Genome IDMTBK01152249
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 13839
End posion on genome 13763
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agctctttga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
tcctgcacgc
Secondary structure (Cloverleaf model)
>WENV180096858	fMet	CAT
                   a      ACCA tcctgcacgc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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