The detailed information of tRNA gene sequence


Sequence ID>WENV180096859
Genome IDMTBK01152293
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1003
End posion on genome 929
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agcatagaaa
tRNA gene sequence 
GGGCGCTTAGCTCAGAGGGAGAGCGTCTGCTTCACGCGCAGAAGGTCGTAGGTTCAAGTC
CTACAGCGCCCACCA
Downstream region at tRNA end position 
attccttatt
Secondary structure (Cloverleaf model)
>WENV180096859	Val	CAC
                   a      ACCA attccttatt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     C A T C C     A
        G A        A      | | | | |     A
      A     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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