The detailed information of tRNA gene sequence


Sequence ID>WENV180096860
Genome IDMTBK01152413
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 351
End posion on genome 278
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
ccttataatt
tRNA gene sequence
ACGGGTGTAGCTCAGTTGGCAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGT
CTCTCCTCCCGTGCaa
Downstream region at tRNA end position
taaaatgcac
Secondary structure (Cloverleaf model)
>WENV180096860	Trp	CCA
                   t      GCaa taaaatgcac
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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