The detailed information of tRNA gene sequence


Sequence ID>WENV180096877
Genome IDMTBK01153206
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 543
End posion on genome 468
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tttatagtgt
tRNA gene sequence 
GGCCCGTTCATCTAGCGGTCTAGGATGCAGGATTCTCAGTCCTGTCACAGGGGTTCGAGT
CCCCTACGGGCTACCA
Downstream region at tRNA end position 
tccttttgcg
Secondary structure (Cloverleaf model)
>WENV180096877	Glu	CTC
                   t      ACCA tccttttgcg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T A       A G G G G     C
    G       + | | |                 T T
    T       G G A T
      C T A        G     TCAC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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