The detailed information of tRNA gene sequence


Sequence ID>WENV180096890
Genome IDMTBK01153858
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3251
End posion on genome 3177
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatctttcaa
tRNA gene sequence 
GGTCTGGTAGTTCAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCCAGACCGCaa
Downstream region at tRNA end position 
aatccccgag
Secondary structure (Cloverleaf model)
>WENV180096890	Asp	GTC
                   a      GCaa aatccccgag
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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